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SLC12A8 – Psoriasis

This summary describes the association between SLC12A8 and psoriasis. Multiple independent studies have identified SLC12A8 as a candidate susceptibility locus for psoriasis through linkage disequilibrium mapping and haplotype association analyses. In the 2002 study, a SNP map spanning a 900–1200 kb interval on chromosome 3q21 was constructed in 195 psoriatic families (PMID:11863360). Later investigations in a German cohort of 210 trios and a case-control group of 375 patients confirmed the association through systematic LD and haplotype analysis (PMID:16297188).

The overall clinical validity of the SLC12A8–psoriasis association is rated as Strong. This conclusion is based on robust evidence from multi-family and independent cohorts, significant SNP and haplotype associations, and statistical support from both transmission disequilibrium tests and case-control studies (PMID:11863360; PMID:16297188).

Genetic evidence demonstrates that multiple SNPs in SLC12A8 are associated with psoriasis. Although a concrete pathogenic variant in HGVS format is not explicitly described in the studies, the analyses consistently report significant haplotype associations. Segregation analysis in these studies indicated that additional affected relatives in extended families contribute to the overall genetic burden, supporting the gene’s role in disease susceptibility.

Given that psoriasis is a complex disorder with a multifactorial genetic architecture, the inheritance pattern for the SLC12A8 association does not follow a classic Mendelian mode. Nonetheless, the observed dominant contribution of risk alleles in the association studies aligns with a complex or non‑Mendelian pattern of inheritance.

While there remains a paucity of direct functional or experimental studies linking SLC12A8 to psoriasis pathogenesis, the protein encoded by this gene shares homology with a family of cation/chloride cotransporters. This homology suggests a plausible biological mechanism whereby alterations in transporter function could contribute to inflammatory skin changes. Thus, the current functional evidence is more limited despite the strong genetic support.

In summary, genetic studies of diverse cohorts consistently demonstrate a statistically significant association between variants in SLC12A8 and psoriasis risk. Although functional evidence is limited, the weight of genetic data provides a coherent narrative for the clinical utility of testing SLC12A8 variants in diagnostic decision‑making for psoriasis. Key take‑home sentence: SLC12A8 represents a robust candidate gene for psoriasis, supporting its integration into genetic risk assessment and personalized clinical management.

References

  • Genomics • 2002 • Identification of a psoriasis susceptibility candidate gene by linkage disequilibrium mapping with a localized single nucleotide polymorphism map PMID:11863360
  • The Journal of Investigative Dermatology • 2005 • Systematic linkage disequilibrium analysis of SLC12A8 at PSORS5 confirms a role in susceptibility to psoriasis vulgaris PMID:16297188
  • The Pharmacogenomics Journal • 2016 • Paradoxical psoriasiform reactions to anti-TNFα drugs are associated with genetic polymorphisms in patients with psoriasis PMID:26194362

Evidence Based Scoring (AI generated)

Gene–Disease Association

Strong

Multiple independent cohort studies with significant SNP associations, large family-based and case-control datasets (PMID:11863360; PMID:16297188) support a robust gene–disease link.

Genetic Evidence

Strong

Evidence from linkage disequilibrium mapping and haplotype analyses in Swedish and German cohorts demonstrates recurrent association signals across multiple studies.

Functional Evidence

Limited

Although SLC12A8’s protein shares homology with cation/chloride cotransporters, direct functional assays linking the gene to psoriasis pathogenesis have not been conducted.