Variant Synonymizer: Platform to identify mutations defined in different ways is available now!
Over 2,000 gene–disease validation summaries are now available—no login required!
Hairless (HR) is a zinc‐finger transcriptional corepressor implicated in the regulation of hair follicle cycling. Pathogenic biallelic variants in HR underlie atrichia with papular lesions (APL; MONDO:0008847), a rare autosomal recessive form of irreversible alopecia characterized by early complete hair loss and development of keratin‐filled papules.
Genetic analyses across multiple consanguineous and nonconsanguineous families have identified over 25 unrelated APL probands harboring homozygous or compound heterozygous loss‐of‐function and missense variants in HR (PMID:15953070; PMID:16211417; PMID:26680117). Variant classes include splice site mutations (e.g., c.2847-1G>A), frameshifts (e.g., c.3435del (p.Ser1146LeufsTer?)), nonsense alleles (e.g., c.3515G>A (p.Gln585Ter)), and recurrent founder deletions (c.3435delC) (PMID:15953070; PMID:12271294).
Segregation of HR variants with APL has been demonstrated in at least 10 families, including compound heterozygous siblings and multiple consanguineous pedigrees, totaling 19 additional affected relatives (PMID:12271294; PMID:16211417). Genotype–phenotype correlations are consistent with complete loss of HR function leading to follicular cyst formation and absence of mature follicles.
Functional assays reveal that most pathogenic HR missense mutations abolish VDR corepressor activity, impair HDAC1 recruitment, and disrupt histone H3K9 demethylase function (PMID:17609203; PMID:24334705). Rescue of HR demethylase activity in vitro confirms the mechanistic basis of pathogenicity and concordance with the human APL phenotype.
No robust conflicting evidence has been reported; one variant (E583V) retains normal corepressor activity and may represent a benign polymorphism (PMID:17609203). Overall, the genetic, segregation, and functional data meet ClinGen criteria for a Strong gene–disease association.
Key take‐home: Biallelic HR loss‐of‐function variants reliably diagnose APL and inform genetic counselling, guiding avoidance of ineffective alopecia treatments and enabling carrier screening.
Gene–Disease AssociationStrong25 probands identified across multiple families (PMID:15953070; PMID:16211417; PMID:26680117), segregation in consanguineous and nonconsanguineous pedigrees (PMID:16211417; PMID:17869066), concordant functional data (PMID:17609203) Genetic EvidenceStrongMultiple LoF and missense variants in >15 families, including compound heterozygotes and homozygotes (PMID:12271294; PMID:15953070) Functional EvidenceModerateCorepressor assays show loss of VDR/HDAC1 repression (PMID:17609203); histone demethylase activity abolished by patient variants (PMID:24334705) |