Variant Synonymizer: Platform to identify mutations defined in different ways is available now!
Over 2,000 gene–disease validation summaries are now available—no login required!
PROP1 encodes a pituitary-specific paired-like homeodomain transcription factor crucial for anterior pituitary development. Homozygous or compound heterozygous loss-of-function variants in PROP1 cause autosomal recessive panhypopituitarism, characterized by combined deficiency of growth hormone (GH), thyroid-stimulating hormone (TSH), prolactin (PRL), luteinizing hormone (LH), follicle-stimulating hormone (FSH), and frequently late-onset adrenocorticotropin (ACTH) insufficiency. Initial reports of a 2 bp deletion, c.301_302delAG (p.Leu102fs), in patients with childhood-onset GH, TSH, and gonadotropin deficiencies established the genotype–phenotype relationship (Pituitary • 2002 • Adrenocorticotrope deficiency… PMID:12812307).
ClinGen classification: Definitive. Over 200 affected individuals, including >50 unrelated families, have been reported with bi-allelic PROP1 variants segregating with panhypopituitarism in a recessive manner. Recurrent hot-spot frameshift (c.301_302del) and missense (c.218G>A (p.Arg73His)) alleles demonstrate consistent segregation and a spectrum of pituitary hormone deficiencies across ethnically diverse cohorts (PMID:9745452; PMID:9824293).
Inheritance mode: Autosomal recessive. Multi-family studies detail segregation of homozygous or compound heterozygous PROP1 variants with panhypopituitarism. Segregation analysis across consanguineous pedigrees identified at least 19 additional affected relatives with segregating pathogenic alleles. Case series describe >80 variant alleles in >200 probands, including frameshift (n>30), missense (n>15), splice (n>10), complete gene deletions (n>5), and regulatory intronic mutations (PMID:19128366).
A representative pathogenic variant: c.301_302del (p.Leu102fs) which ablates the homeodomain, leading to severe pituitary hypoplasia and hormone deficiencies.
Mechanism: Loss of PROP1 DNA-binding and transactivation leads to failure of Pit1 (POU1F1) induction and subsequent somato-, lacto-, and thyrotrope differentiation. Mouse Prop1 knockouts recapitulate human combined pituitary hormone deficiency and progressive ACTH loss, confirming developmental role (PMID:17557180). In vitro studies of intronic regulatory variants demonstrate reduced enhancer activity on PROP1 promoter constructs, supporting haploinsufficiency in sporadic cases (PMID:22745233).
No studies have refuted the PROP1–panhypopituitarism association. Variability in age of onset and pituitary morphology has been observed but aligns with evolving hormone deficiencies.
PROP1 is a well-validated, autosomal recessive cause of panhypopituitarism with definitive clinical validity. Genetic testing for PROP1 variants is recommended in patients presenting with childhood-onset combined pituitary hormone deficiencies, particularly with familial or consanguineous backgrounds. Identification of pathogenic PROP1 variants enables early hormone replacement, long-term adrenal monitoring, and informed genetic counseling.
Key Take-home: PROP1 mutation analysis is critical for accurate diagnosis and management of autosomal recessive panhypopituitarism.
Gene–Disease AssociationDefinitive
Genetic EvidenceStrong
Functional EvidenceModerateMouse Prop1 knockout replicates human phenotype; in vitro regulatory assays concordant |