Variant Synonymizer: Platform to identify mutations defined in different ways is available now!
Over 2,000 gene–disease validation summaries are now available—no login required!
SCN8A encodes the voltage-gated sodium channel Nav1.6, broadly expressed in central and peripheral neurons. Heterozygous de novo mutations in SCN8A underlie Early Infantile Epileptic Encephalopathy-13 (EIEE13), characterized by refractory seizures, developmental regression, movement disorders, and elevated SUDEP risk. Genetic testing for SCN8A variants is therefore critical in infants with early-onset epileptic encephalopathy.
Three unrelated probands have been reported with de novo missense SCN8A variants: one presented with neonatal tremor episodes and hyperekplexia-like startles in association with pharmacoresistant epilepsy (PMID:30078772), a second with infantile spasms evolving to focal and generalized tonic-clonic seizures (PMID:35188110), and a third requiring perioperative management under neuraxial anesthesia (PMID:36357057).
Missense variants predominate in EIEE13, particularly in voltage-sensor and pore regions. Recurrent hotspots include p.Thr767Ile (c.2003C>T) and p.Arg1872Trp with gain-of-function effects. Rare loss-of-function alleles present with intellectual disability without seizures, underscoring variant-specific phenotypic spectra.
Inheritance is autosomal dominant with de novo occurrence in all reported EIEE13 cases; no familial segregation of the epileptic phenotype has been documented. Segregation analyses have not identified unaffected carriers among first-degree relatives.
Functional assays in heterologous systems demonstrate gain-of-function mechanisms: p.Thr767Ile shows enhanced channel activation (PMID:24874546), p.Arg233Gly exhibits reduced current amplitude but increased slow ramp response (PMID:25239001), and p.Arg1913Trp impairs inactivation leading to elevated persistent current (PMID:30615041).
Knock-in mouse models recapitulate the human phenotype: Scn8aAsn1768Asp/+ mice develop convulsive seizures and SUDEP (PMID:25227913), while conditional expression of p.Arg1872Trp in excitatory neurons induces early lethality (PMID:30601941).
Collectively, the genetic and experimental concordance supports a Moderate clinical validity for SCN8A-EIEE13. Functional data reach Strong levels under ClinGen criteria. SCN8A testing should be included in gene panels for infantile epileptic encephalopathy, and variant-specific functional classification can inform precision therapy.
Key Take-home: De novo SCN8A gain-of-function variants cause EIEE13; genetic diagnosis enables targeted management and informs antiepileptic drug selection.
Gene–Disease AssociationModerateThree unrelated probands with de novo SCN8A missense variants and concordant experimental and animal model data Genetic EvidenceModerateThree de novo missense SCN8A variants in unrelated individuals meeting ClinGen genetic criteria Functional EvidenceStrongMultiple independent electrophysiological assays and knock-in mouse models demonstrating gain-of-function mechanisms |