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Biallelic loss-of-function variants in NEUROG3 underlie congenital malabsorptive diarrhea 4, characterized by severe secretory diarrhea in infancy, enteric anendocrinosis, and insulin-dependent diabetes mellitus. NEUROG3 encodes a basic helix-loop-helix transcription factor essential for enteroendocrine and pancreatic endocrine progenitor cell differentiation.
To date, at least 12 unrelated individuals from seven families have been reported with biallelic NEUROG3 variants presenting with congenital diarrhea and variable diabetes onset (PMID:16855267; PMID:21378176; PMID:28724572; PMID:32574610; PMID:31805014; PMID:36149814; PMID:21490072).
Inheritance is autosomal recessive, with parents of compound heterozygous probands unaffected, consistent with recessive segregation and no reported dominant phenotypes.
The variant spectrum includes homozygous nonsense (p.Glu74Ter), frameshift (p.Pro71fs), and missense changes such as c.413C>G (p.Thr138Arg) (PMID:32574610), with most alleles private to individual kindreds and no clear founder variants described.
Functional studies demonstrate that NEUROG3 variants abolish DNA binding to E-box elements, fail to activate the NEUROD1 promoter in vitro, and cannot induce endocrine lineage commitment in Xenopus embryos or human intestinal/pancreatic organoids, supporting a loss-of-function mechanism (PMID:16855267; PMID:31178402).
In summary, the association between NEUROG3 and congenital malabsorptive diarrhea 4 is definitive, supported by robust genetic and functional concordance over >15 years. NEUROG3 sequencing should be prioritized in neonates with unexplained severe diarrhea and later-onset diabetes to inform diagnosis, management, and genetic counseling.
Gene–Disease AssociationDefinitive12 probands across 7 families over >15 years; autosomal recessive segregation and concordant functional data Genetic EvidenceStrong12 affected individuals with biallelic NEUROG3 variants demonstrating recessive inheritance Functional EvidenceModerateMultiple in vitro and in vivo assays show loss of DNA binding and transcriptional activity consistent with enteroendocrine deficiency |