Variant Synonymizer: Platform to identify mutations defined in different ways is available now!
Over 2,000 gene–disease validation summaries are now available—no login required!
Episodic ataxia type 2 (EA2) is an autosomal dominant paroxysmal cerebellar channelopathy characterized by recurrent attacks of vertigo, ataxia, nystagmus, nausea, and fatigue, often responsive to acetazolamide. EA2 is caused by heterozygous mutations in CACNA1A, encoding the P/Q-type voltage‐gated calcium channel α1A subunit Gene Symbol associated with EA2.
Multiple case series and linkage studies support a definitive gene–disease relationship. A de novo C>T substitution at c.4410 in exon 23 resulting in p.Ter1470Ter was identified in a sporadic EA2 patient responsive to acetazolamide (PMID:9600739). In familial EA2, a novel splice-site mutation IVS36-2A>G segregated in 13 affected individuals across three generations with a maximum LOD score of 4.48 (PMID:14530926). Conversely, a kindred with typical EA2 lacked CACNA1A mutations, highlighting locus heterogeneity (PMID:12525875).
The variant spectrum in EA2 exceeds 50 alleles, including nonsense, frameshift, splice-site, missense, and large‐scale deletions. Representative variants include c.1913G>A (p.Gly638Asp) identified in late-onset EA2 with interictal dystonia (PMID:19232643), IVS36-2A>G splice-site, and multiexon deletions detected by MLPA (PMID:19633872).
Functional assays demonstrate that truncating and missense EA2 mutations yield loss-of-function via reduced Ca2+ currents, impaired membrane trafficking, or accelerated inactivation. Six new truncations in familial and sporadic cases abolished channel function (PMID:10371528); two novel truncating mutations were linked to interictal dystonia (PMID:15710862). The H1736L missense variant near the pore reduced current density and shifted activation to more positive voltages (PMID:15293273). Premature stop codons in an EF-hand exon abolished facilitation (PMID:18606230).
Confounding evidence in EA2-like pedigrees without CACNA1A mutations suggests additional loci may underlie EA2 phenotypes (PMID:12525875). However, comprehensive genetic and functional concordance across numerous unrelated families supports a definitive classification for CACNA1A–EA2.
Key take-home: Heterozygous CACNA1A mutations cause EA2 via P/Q channel loss-of-function; genetic testing and functional annotation guide diagnosis and acetazolamide therapy.
Gene–Disease AssociationDefinitiveMultiple unrelated pedigrees including de novo and familial cases with robust segregation and functional concordance across >50 probands Genetic EvidenceStrong
Functional EvidenceStrongConsistent loss-of-function in heterologous and neuronal models across truncating and missense mutations, with defective trafficking, gating shifts, and abolished facilitation |