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CORO1A – severe combined immunodeficiency due to CORO1A deficiency

Autosomal recessive loss‐of‐function variants in CORO1A underlie a unique form of T(–)B(+)NK(+) severe combined immunodeficiency characterized by profound naïve T‐cell lymphopenia and variable mucocutaneous and infectious phenotypes. Six affected individuals from three unrelated kindreds demonstrate that biallelic CORO1A disruption abrogates Coronin-1A function and impairs T-cell homeostasis ([PMID:25073507]; [PMID:23522482]; [PMID:18836449]).

In the first non‐consanguineous kindred, two siblings harbored compound heterozygous frameshift alleles c.248_249delCT (p.Pro83ArgfsTer10) and c.1077delC (p.Gln360ArgfsTer44), presenting after age 7 y with absent CD4⁺ CD45RA⁺ naïve T cells, low NK counts, double-negative αβ T-cells, epidermodysplasia verruciformis–HPV, molluscum contagiosum, granulomatous leprosy and bronchiectasis; one sibling succumbed to EBV⁺ lymphoma at 16 y ([PMID:25073507]). In a second consanguineous pedigree three siblings were homozygous for a hypomorphic c.400G>A (p.Val134Met) variant leading to near‐absent Coronin-1A expression, early EBV‐associated B‐cell lymphoproliferation and naïve T-cell lymphopenia ([PMID:23522482]). A single patient with a homozygous c.76G>A (p.Glu26Lys) mutation recapitulated the T-cell egress defect in a peripheral T-cell‐deficient mouse strain and human SCID ([PMID:18836449]).

Segregation across three families confirms autosomal recessive inheritance, with all six affected siblings inheriting biallelic CORO1A variants from heterozygous carrier parents and unaffected siblings (affected_relatives = 5).

Functional assays demonstrate complete loss or alteration of Coronin-1A protein. Western blotting in patient cells shows absent or markedly reduced protein for frameshift and missense variants, correlating with impaired T-cell receptor repertoire diversity, diminished invariant NKT and mucosal‐associated invariant T cells, and severely reduced thymic output ([PMID:23522482]; [PMID:26476480]). The c.76G>A (p.Glu26Lys) allele in both mouse and human abolishes Arp2/3 regulation and T-cell migration without dominant‐negative effects, indicating loss of critical actin‐binding and signaling functions ([PMID:26108624]).

Animal and cellular models recapitulate human immunophenotypes: the Ptcd mouse strain harboring p.Glu26Lys exhibits thymic egress blockade and T-cell lymphopenia, while patient‐derived lymphocytes with the S401fs variant show defective oligomerization, cytoskeletal association and accelerated F‐actin accumulation, underscoring the importance of C-terminal domains in T-cell survival ([PMID:18836449]; [PMID:26476480]).

Integrated evidence supports a Strong gene‐disease association. Biallelic truncating and hypomorphic variants in CORO1A cause a distinctive T(–)B(+)NK(+) SCID with mucocutaneous viral susceptibility, granulomatous infections and shortened telomeres, underscoring the need for early genetic diagnosis and tailored immune reconstitution strategies. Key take‐home: CORO1A testing should be included in AR-SCID panels to guide timely hematopoietic stem cell transplantation and infection surveillance.

References

  • Journal of clinical immunology • 2014 • Compound heterozygous CORO1A mutations in siblings with a mucocutaneous-immunodeficiency syndrome of epidermodysplasia verruciformis-HPV, molluscum contagiosum and granulomatous tuberculoid leprosy. PMID:25073507
  • The Journal of allergy and clinical immunology • 2013 • Whole-exome sequencing identifies Coronin-1A deficiency in 3 siblings with immunodeficiency and EBV-associated B-cell lymphoproliferation. PMID:23522482
  • Nature immunology • 2008 • The actin regulator coronin 1A is mutant in a thymic egress-deficient mouse strain and in a patient with severe combined immunodeficiency. PMID:18836449
  • Molecular biology of the cell • 2015 • The disease-linked Glu-26-Lys mutant version of Coronin 1A exhibits pleiotropic and pathway-specific signaling defects. PMID:26108624
  • The Journal of allergy and clinical immunology • 2016 • Recurrent viral infections associated with a homozygous CORO1A mutation that disrupts oligomerization and cytoskeletal association. PMID:26476480
  • The Journal of allergy and clinical immunology. Global • 2024 • Novel hemizygous CORO1A variant leads to combined immunodeficiency with defective platelet calcium signaling and cell mobility. PMID:37915722

Evidence Based Scoring (AI generated)

Gene–Disease Association

Strong

Six probands in three unrelated families, autosomal recessive inheritance, concordant functional studies across human and mouse models

Genetic Evidence

Strong

Biallelic truncating and hypomorphic CORO1A variants in six affected individuals from three kindreds with segregation in all families

Functional Evidence

Moderate

Protein expression assays, actin‐binding studies, cell migration and rescue experiments, and Ptcd mouse model replicate human phenotype