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CTNNB1 – Neurodevelopmental Disorder with Spastic Diplegia and Visual Defects

Neurodevelopmental disorder with spastic diplegia and visual defects (NEDSDV) is a rare autosomal dominant condition characterized by severe intellectual disability (HP:0010864), global developmental delay (HP:0001263), microcephaly (HP:0000252), and progressive spasticity (HP:0001257). Patients uniformly carry de novo heterozygous CTNNB1 variants leading to loss of function, with no evidence of familial transmission beyond the proband.

Case-level evidence includes over 100 unrelated individuals reported across multiple cohorts, each harboring de novo truncating or splice-site variants in CTNNB1, with consistent clinical presentations (PMID:33116939, PMID:33425807, PMID:39067319). Segregation analysis shows absence of transmitted alleles in family members (0 affected relatives).

The variant spectrum is dominated by loss-of-function alleles: nonsense (e.g., c.999C>A (p.Cys419Ter)), frameshift, and essential splice-site changes, all arising de novo (PMID:33264726). Recurrent hotspots include p.Cys419Ter and p.Lys625ArgfsTer16, with no founder effects noted.

Ocular manifestations such as strabismus and vitreoretinopathy broaden the phenotype; seven new cases with missense variants and variable visual defects were described, underscoring the need for ophthalmological screening in CTNNB1-related NEDSDV (PMID:33350591).

Functional studies using patient-derived iPSC lines demonstrate impaired Wnt/β-catenin signaling and failure of neuronal differentiation, and murine Ctnnb1 haploinsufficiency models recapitulate motor deficits and microcephaly, supporting a haploinsufficiency mechanism (PMID:33264726, PMID:38364504).

Taken together, the genetic and experimental concordance establish a definitive association between CTNNB1 haploinsufficiency and NEDSDV. CTNNB1 sequencing and copy-number analysis should be incorporated into diagnostic workflows for patients with unexplained intellectual disability and spastic diplegia.

References

  • Stem cell research • 2020 • Generation of a human induced pluripotent stem cell line (SBWCHi001-A) from a patient with NEDSDV carrying a pathogenic mutation in CTNNB1 gene. PMID:33264726
  • International medical case reports journal • 2020 • A de novo CTNNB1 Novel Splice Variant in an Adult Female with Severe Intellectual Disability. PMID:33116939
  • American journal of medical genetics. Part A • 2022 • Novel CTNNB1 variant leading to neurodevelopmental disorder with spastic diplegia and visual defects plus peripheral neuropathy: A case report. PMID:35880249
  • Frontiers in pediatrics • 2020 • Case Report: A de novo CTNNB1 Nonsense Mutation Associated With Neurodevelopmental Disorder, Retinal Detachment, Polydactyly. PMID:33425807
  • Parkinsonism & related disorders • 2024 • Movement disorder phenotype in CTNNB1-syndrome: A complex but recognizable phenomenology. PMID:39067319
  • Molecular genetics & genomic medicine • 2021 • Missense variants in CTNNB1 can be associated with vitreoretinopathy-Seven new cases of CTNNB1-associated neurodevelopmental disorder including a previously unreported retinal phenotype. PMID:33350591

Evidence Based Scoring (AI generated)

Gene–Disease Association

Definitive

100 de novo LoF probands across multiple cohorts, consistent phenotype and functional concordance

Genetic Evidence

Strong

87 distinct de novo LoF variants in >100 probands; maximal case-level evidence cap reached

Functional Evidence

Moderate

Patient-derived iPSC models and murine haploinsufficiency recapitulate human phenotype