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OTUD5 – Multiple congenital anomalies-neurodevelopmental syndrome, X-linked

The deubiquitylase OTUD5 regulates K48/K63 linkage-specific ubiquitin cleavage during embryonic development and is disrupted in an X-linked disorder characterized by multiple congenital anomalies and neurodevelopmental delay, termed LINKED syndrome or multiple congenital anomalies-neurodevelopmental syndrome, X-linked.

Genetic evidence stems from 10 unrelated hemizygous male patients carrying distinct OTUD5 missense variants identified by exome sequencing (PMID:33523931). Inheritance follows an X-linked recessive pattern with no reported additional segregating affected relatives.

The variant spectrum comprises eight missense changes across the catalytic and ubiquitin-binding domains. A representative alteration is c.863T>C (p.Met288Thr), which resides in the catalytic OTU domain and disrupts K48-specific deubiquitylase activity.

Functional studies in induced pluripotent stem cell models demonstrate that patient OTUD5 variants impair deubiquitylation of chromatin remodelers (ARID1A/B, HDAC2, HCF1), leading to reduced chromatin accessibility at neuroectodermal enhancers and aberrant gene expression during differentiation (PMID:33523931).

Mechanistically, loss of OTUD5 activity results in accelerated proteasomal degradation of critical chromatin regulators, indicating a loss-of-function paradigm underlies embryonic neurodevelopmental defects.

In summary, 10 hemizygous OTUD5 variants in males and concordant cellular phenotype provide Moderate clinical validity and functional evidence for this X-linked syndrome. Key take-home: OTUD5 genetic testing aids diagnosis of LINKED syndrome and informs on underlying deubiquitylation-based pathogenic mechanisms.

References

  • Science Advances • 2021 • Linkage-specific deubiquitylation by OTUD5 defines an embryonic pathway intolerant to genomic variation. PMID:33523931

Evidence Based Scoring (AI generated)

Gene–Disease Association

Moderate

10 hemizygous male probands ([PMID:33523931]), no segregation but functional concordance

Genetic Evidence

Moderate

10 unrelated hemizygous variants in OTUD5 reaching ClinGen moderate genetic cap

Functional Evidence

Moderate

Cellular differentiation assays and chromatin accessibility studies demonstrate pathogenic mechanism