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Leber congenital amaurosis type 10 (LCA10) is an autosomal recessive ciliopathy presenting with congenital severe visual impairment, extinguished electroretinogram responses, and nystagmus. CEP290 loss-of-function underlies the disease through disruption of photoreceptor ciliary transport and outer segment formation.
The deep intronic founder variant c.2991+1655A>G was identified homozygously and in compound heterozygosity with truncating CEP290 alleles in seven unrelated LCA10 probands (PMID:30114557). Additional biallelic nonsense and frameshift CEP290 mutations have been described in multiple cohorts, confirming a consistent genotype–phenotype correlation.
Mechanistically, c.2991+1655A>G creates a cryptic splice donor site, resulting in insertion of a pseudoexon (exon X) and frameshift. Antisense oligonucleotide (AON) therapy efficiently excludes exon X in patient-derived cells, restores full-length CEP290 protein, and rescues ciliary defects (PMID:27106101). In humanized mouse models, intravitreal AON delivery yields durable splicing correction without retinal toxicity.
CRISPR/Cas9-mediated excision of the intronic mutation in engineered 293FT cells and mouse retina reinstates wild-type CEP290 expression and normal ciliation, demonstrating the feasibility of genome editing for LCA10 (PMID:28109959).
A zebrafish cep290 knockdown model showed that expression of the human CEP290 N-terminal region alone rescues visual behavior and photoreceptor structure, delineating key functional domains for potential gene augmentation strategies (PMID:21257638).
Together, these data provide strong genetic evidence and moderate experimental concordance supporting a loss-of-function mechanism for CEP290 in LCA10. Molecular diagnosis of c.2991+1655A>G and truncating CEP290 variants is critical for early diagnosis, carrier screening, and guiding emerging splice-modulating or genome-editing therapies.
Gene–Disease AssociationStrongSeven unrelated LCA10 probands with biallelic CEP290 variants including a founder deep intronic allele (c.2991+1655A>G) and consistent early-onset severe phenotype Genetic EvidenceStrongMultiple homozygous and compound heterozygous LOF and splice variants identified in at least seven unrelated LCA10 patients (PMID:30114557) Functional EvidenceModerateSplice correction by AONs and CRISPR/Cas9 restored CEP290 expression and ciliary function in patient cells and mouse retina (PMID:27106101; PMID:28109959) |