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MAP3K1 – Breast Cancer

Mitogen-activated protein kinase kinase kinase 1 (MAP3K1) has emerged from multiple genome-wide association studies as a low-penetrance susceptibility gene for breast cancer. A common intronic single nucleotide polymorphism, rs889312, in MAP3K1 shows a consistent per-allele odds ratio of approximately 1.09–1.12 for breast cancer risk across diverse populations ([PMID:18355772];[PMID:20809358]). This association has been replicated in over 59,000 cases and 33,000 controls, including BRCA1/2 mutation carriers and general population cohorts, and further validated by meta-analysis encompassing 20 case-control studies ([PMID:24595411]).

Genetic evidence is derived primarily from large case-control studies in European, Asian, and African American cohorts. In a meta-analysis of 26,015 breast cancer cases and 33,962 controls, the rs889312 C allele conferred a significant risk (homozygote codominant OR 1.22, 95% CI 1.15–1.29; allele contrast OR 1.09, 95% CI 1.07–1.12) without evidence of heterogeneity across genetic models ([PMID:20809358]). Additional GWAS and replication studies in >10,000 BRCA2 mutation carriers demonstrated a per-allele hazard ratio of 1.12 (95% CI 1.01–1.23, p = 0.02) for rs889312 in modifying breast cancer risk ([PMID:18355772]). While common intronic variants predominate, rare coding MAP3K1 variants (e.g., c.2062C>G (p.Leu688Val)) have been reported in other contexts, providing anchors for mechanistic insights.

Functional and experimental studies position MAP3K1 as a central regulator of JNK and ERK signaling cascades that influence cell proliferation, apoptosis, and stress responses. In vitro assays demonstrate that MAP3K1 autophosphorylation activates downstream MEK4/SEK1 and MEK1 pathways, with dominant-negative MEKK1 mutants attenuating stress-induced JNK activation ([PMID:9278437];[PMID:10891478]). Although these studies are not breast-specific, they establish a mechanistic framework by which MAP3K1 variants could modulate hormonally driven tumorigenesis.

In breast cancer cell models, MAP3K1 signaling has been implicated in apoptosis and proliferation control. MEKK1 overexpression sensitizes cells to osmotic and genotoxic stress via c-Jun degradation and enhanced JNK-dependent apoptosis ([PMID:17101801]), processes that may intersect with estrogen receptor-positive breast tumor biology. Moreover, MAP3K1 variants altering kinase or ubiquitin ligase domains can disrupt co-factor interactions, further influencing downstream β-catenin and FOXL2 pathways relevant to hormone-dependent growth.

No significant conflicting evidence has been reported for MAP3K1 in breast cancer; inverse associations with endometrial cancer risk and lack of strong ovarian cancer risk associations underscore tissue-specific effects rather than refuting the breast cancer link. The consistency of rs889312 associations across >10 independent cohorts, coupled with enriched functional concordance, supports a clinically meaningful contribution of MAP3K1 to breast cancer risk prediction.

Integration of genetic and experimental data indicates that MAP3K1 functions as a modifier gene in polygenic breast cancer risk, primarily via modulation of MAPK signaling and apoptosis. While not a high-penetrance cancer gene, inclusion of MAP3K1 rs889312 in polygenic risk scores can enhance risk stratification for both general and BRCA2 mutation carrier populations. Key Take-home: MAP3K1 intronic variants, notably rs889312, represent validated low-penetrance breast cancer risk factors with mechanistic underpinnings in MAPK pathway modulation, supporting their integration into clinical risk models.

References

  • American journal of human genetics • 2008 • Common breast cancer-predisposition alleles are associated with breast cancer risk in BRCA1 and BRCA2 mutation carriers. PMID:18355772
  • Breast cancer research and treatment • 2011 • Association between mitogen-activated protein kinase kinase kinase 1 rs889312 polymorphism and breast cancer risk: evidence from 59,977 subjects. PMID:20809358
  • PloS one • 2014 • Association between mitogen-activated protein kinase kinase kinase 1 polymorphisms and breast cancer susceptibility: a meta-analysis of 20 case-control studies. PMID:24595411

Evidence Based Scoring (AI generated)

Gene–Disease Association

Moderate

Consistent association of intronic SNP rs889312 in multiple GWAS and meta-analyses with over 60,000 cases confirming small increased risk ([PMID:18355772];[PMID:20809358])

Genetic Evidence

Strong

Multiple large-scale GWAS and meta-analyses totaling over 59,000 cases and 33,000 controls with consistent association of SNP rs889312 ([PMID:20809358])

Functional Evidence

Limited

In vitro kinase and stress-response assays demonstrate MAP3K1 role in JNK/ERK signaling but no direct in vivo breast cancer model is established