Variant Synonymizer: Platform to identify mutations defined in different ways is available now!
Over 2,000 gene–disease validation summaries are now available—no login required!
MT-ND2 encodes the mitochondrially-encoded NADH dehydrogenase subunit 2, a core component of respiratory complex I. Pathogenic variants in MT-ND2 compromise electron transport, leading to the heterogeneous clinical presentation of mitochondrial complex I deficiency (MONDO:0100133), which manifests with neuromuscular, ocular and multisystem involvement.
A prospective cohort of 13 patients with complex I deficiency demonstrated frequent visual impairment, ptosis and optic atrophy in those harboring mitochondrial gene defects (13 probands) (PMID:20346082). In a retrospective study of 133 Chinese children, mtDNA sequencing in 62 patients identified MT-ND2 variants in 32 individuals (51.6%) including the recurrent 4833A>G change in 11.3% of cases (PMID:24502327). A single-patient report described a heteroplasmic c.4831G>A (p.Gly121Asp) substitution in MT-ND2, present at 95% in muscle and correlating with isolated complex I deficiency (PMID:28070494). These data support multiple unrelated probands with MT-ND2 mutations in complex I deficiency.
MT-ND2 variants follow maternal transmission. There is limited formal segregation data in complex I deficiency pedigrees for MT-ND2, and no additional affected relatives have been documented beyond case reports.
Cybrid studies of the MT-ND2 C4936T (p.Thr156Ile) mutation revealed a 60% reduction in oxygen consumption and 75% decrease in reactive oxygen species production, with aberrant cell growth phenotypes under differing metabolic conditions (PMID:22925728). Modeling of human MT-ND2 clinical variants in E. coli showed concordant reductions in deamino-NADH oxidase and proton translocation activities, confirming impaired complex I function (PMID:35306226).
Collectively, cohort and case-level studies establish that MT-ND2 missense mutations are recurrent in complex I deficiency, and functional assays consistently demonstrate loss of complex I activity. There are no reported studies refuting these associations. The genetic and mechanistic concordance supports a Moderate level of clinical validity under ClinGen criteria.
Key Take-home: MT-ND2 pathogenic variants cause mitochondrial complex I deficiency via impaired electron transport, warranting mtDNA sequencing in suspected cases to inform diagnosis and management.
Gene–Disease AssociationModerateMultiple studies with 13 probands (PMID:20346082) and 62 patients screened showing 32 MT-ND2 variants (PMID:24502327); functional concordance in cybrid and bacterial models. Genetic EvidenceModerateCase-level: c.4831G>A (p.Gly121Asp) in heteroplasmic muscle (PMID:28070494); cohort-level: recurrent ND2 variants in 51.6% of patients (PMID:24502327). Functional EvidenceModerateCybrid assays of C4936T (p.Thr156Ile) show reduced OXPHOS (PMID:22925728); E. coli modeling of clinical ND2 mutations demonstrates impaired complex I activity (PMID:35306226). |