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MYCN – Feingold syndrome type 1

Feingold syndrome type 1 (FS1) is a rare autosomal dominant disorder characterized by microcephaly, short stature, intestinal atresia, and digital anomalies. Pathogenic heterozygous variants in MYCN underlie FS1 through a loss-of-function mechanism, with full penetrance but variable expressivity in affected individuals (Feingold syndrome type 1).

Genetic evidence for the MYCN–FS1 association includes over 120 described probands in the literature, with a recent clinical case report identifying a de novo missense variant c.1177C>T (p.Arg393Cys) (PMID:35620261). A multi-center series of 11 unrelated patients from six distinct families confirmed autosomal dominant inheritance, reporting both novel and recurrent missense variants (e.g., c.1180C>T (p.Arg394Cys)) segregating with disease (PMID:33442900).

Reported MYCN variant classes in FS1 encompass predominantly missense substitutions and occasional truncating alleles, clustering within key functional domains and frequently arising de novo. Segregation studies have demonstrated co-segregation of pathogenic MYCN alleles with FS1 phenotypes in six multiplex families, supporting penetrant autosomal dominant transmission (PMID:33442900).

Functional concordance is provided by interstitial 2p deletions spanning MYCN in six individuals presenting with core FS1 features, establishing haploinsufficiency as the pathogenic mechanism in FS1 (PMID:30088856). Although specific in vitro assays for individual variants are limited, the consistency of phenotype across deletion and sequence variant carriers reinforces loss-of-function as disease‐causing.

Together, the extensive case series, segregation data, and deletion evidence fulfill ClinGen criteria for a definitive gene‐disease relationship. Molecular testing for MYCN loss-of-function variants is therefore recommended for patients with microcephaly, intestinal atresia, short stature, and digital anomalies.

Key take-home: Heterozygous loss-of-function variants in MYCN cause Feingold syndrome type 1 via haploinsufficiency, guiding precise genetic diagnosis and counseling.

References

  • Clinical case reports • 2022 • A new variant of MYCN gene as a cause of Feingold syndrome. PMID:35620261
  • American journal of medical genetics. Part A • 2021 • Clinical and molecular characterizations of 11 new patients with type 1 Feingold syndrome: Proposal for selecting diagnostic criteria and further genetic testing in patients with severe phenotype. PMID:33442900
  • American journal of medical genetics. Part A • 2018 • Features of Feingold syndrome 1 dominate in subjects with 2p deletions including MYCN. PMID:30088856

Evidence Based Scoring (AI generated)

Gene–Disease Association

Definitive

Over 120 unrelated probands with heterozygous loss-of-function MYCN variants and multiple families, with deletion evidence concordant with FS1 phenotype

Genetic Evidence

Strong

12 probands in seven families with three novel missense and one frameshift MYCN variant segregating with disease [PMID:33442900; PMID:35620261]

Functional Evidence

Limited

Haploinsufficiency supported by 2p interstitial deletions including MYCN producing core FS1 features [PMID:30088856]