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PAX4, a paired-homeodomain transcription factor critical for pancreatic β-cell development, has been implicated in autosomal dominant maturity-onset diabetes of the young type 9 ([MODY9]) via rare heterozygous variants. MODY9 is characterized by early-onset hyperglycemia, polyuria, and polydipsia, requiring tailored therapeutic strategies ([PMID:36595822]).
Genetic evidence includes at least 4 unrelated probands with heterozygous PAX4 variants: one Chinese infant with c.487C>T ([PMID:36595822]), two Thai probands carrying R164W and IVS7-1G>A ([PMID:17426099]), and a Japanese patient harboring c.385C>T (p.Arg129Trp) with familial segregation ([PMID:21263211]). The mode of inheritance is autosomal dominant, and R164W segregated with diabetes in multiple affected family members (3 relatives) ([PMID:17426099]).
The variant spectrum comprises missense changes (e.g., c.385C>T (p.Arg129Trp)), splice-site disruptions (c.772-1G>A leading to p.Gln250del), and frameshift or nonsense alleles. No recurrent or founder variants have been described to date, and population frequencies are absent, underscoring rarity in MODY9.
Functional studies demonstrate that splicing mutation IVS7-1G>A disrupts the PAX4 acceptor site, yielding a p.Gln250del protein with impaired repression of insulin and glucagon promoters and increased β-cell apoptosis under hyperglycemic stress ([PMID:25951767]). R164W and p.Arg192His alleles also exhibit reduced transcriptional repressor activity on β-cell target promoters in luciferase assays, consistent with a loss-of-function mechanism ([PMID:17426099]; [PMID:22521316]). Human iPSC-derived islet models with p.Arg192His and p.Tyr186Ter show aberrant endocrine differentiation and diminished insulin content, reversible by gene correction ([PMID:37777536]).
Although PAX4 p.Arg192His is a common East Asian risk allele for type 2 diabetes, its modest effect contrasts with the highly penetrant loss-of-function mutations in MODY9, emphasizing distinct clinical contexts ([PMID:29941447]).
Integration of genetic segregation and robust functional data supports a Strong gene–disease association for PAX4 and MODY9. Genetic testing for PAX4 should be considered in early-onset, nonautoimmune diabetes to guide precision therapy and prognosis.
Gene–Disease AssociationStrong4 probands, familial segregation ([PMID:17426099]) and concordant functional data Genetic EvidenceStrong4 unrelated probands with heterozygous PAX4 variants and co-segregation Functional EvidenceModerateSplicing assays, transcriptional reporter and iPSC models demonstrate loss of repressor function leading to β-cell dysfunction |